STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Paes_1552KEGG: cph:Cpha266_0396 hypothetical protein. (197 aa)    
Predicted Functional Partners:
Paes_1843
KEGG: gvi:glr3963 thiol-disulfide interchange protein DsbD homolog.
  
     0.485
Paes_0609
KEGG: cte:CT0397 hypothetical protein.
  
     0.469
Paes_0948
Phosphate uptake regulator, PhoU; PFAM: PhoU family protein; KEGG: cte:CT0903 transcriptional regulator, putative.
  
    0.462
Paes_2160
KEGG: pvi:Cvib_0760 cytochrome c family protein.
  
 
 0.458
Paes_0381
PFAM: outer membrane chaperone Skp (OmpH); KEGG: pvi:Cvib_1549 outer membrane chaperone Skp (OmpH).
    
 
 0.432
Paes_1205
KEGG: cte:CT1721 hypothetical protein.
  
     0.430
Paes_1551
PFAM: GCN5-related N-acetyltransferase; KEGG: cch:Cag_0596 acetyltransferase, GNAT family.
       0.418
Your Current Organism:
Prosthecochloris aestuarii
NCBI taxonomy Id: 290512
Other names: P. aestuarii DSM 271, Prosthecochloris aestuarii DSM 271, Prosthecochloris aestuarii SK 413, Prosthecochloris aestuarii SK413/DSMZ 271(t), Prosthecochloris aestuarii str. DSM 271, Prosthecochloris aestuarii strain DSM 271
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.