STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Paes_2085PFAM: von Willebrand factor type A; KEGG: cte:CT2279 hypothetical protein. (336 aa)    
Predicted Functional Partners:
Paes_2088
PFAM: protein of unknown function DUF58; KEGG: cph:Cpha266_2454 protein of unknown function DUF58.
 
   
 0.954
Paes_2089
PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: cph:Cpha266_2455 ATPase associated with various cellular activities, AAA_3.
 
   
 0.892
Paes_2086
PFAM: von Willebrand factor type A; KEGG: cph:Cpha266_2452 von Willebrand factor, type A.
 
    
0.841
Paes_2087
KEGG: cph:Cpha266_2453 hypothetical protein.
 
     0.828
Paes_2121
KEGG: cte:CT0078 hypothetical protein.
 
   
 0.703
Paes_2090
KEGG: cph:Cpha266_2456 hypothetical protein.
       0.478
Paes_2084
KEGG: cte:CT2280 hypothetical protein.
       0.463
Your Current Organism:
Prosthecochloris aestuarii
NCBI taxonomy Id: 290512
Other names: P. aestuarii DSM 271, Prosthecochloris aestuarii DSM 271, Prosthecochloris aestuarii SK 413, Prosthecochloris aestuarii SK413/DSMZ 271(t), Prosthecochloris aestuarii str. DSM 271, Prosthecochloris aestuarii strain DSM 271
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.