STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GOX0100Putative membrane-spanning protein. (49 aa)    
Predicted Functional Partners:
GOX0101
Putative membrane-spanning protein.
 
     0.883
GOX0099
Putative transcriptional regulator.
  
    0.505
GOX0097
ABC transporter ATP-binding protein.
       0.494
GOX0098
ABC transporter subunit.
       0.494
GOX0094
Phenylacetic acid degradation protein PaaD.
       0.479
GOX0095
NifS-like aminotransferase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
       0.479
GOX0096
ABC transporter permease protein.
       0.479
GOX2118
Putative L-aminopeptidase/D-esterase.
  
     0.465
GOX0102
Putative phosphoenolpyruvate carboxylase; Belongs to the PEPCase type 1 family.
       0.411
GOX1490
Putative glycosyltransferase.
  
     0.400
Your Current Organism:
Gluconobacter oxydans
NCBI taxonomy Id: 290633
Other names: G. oxydans 621H, Gluconobacter oxydans 621H, Gluconobacter oxydans str. 621H, Gluconobacter oxydans strain 621H
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