Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GOX0401 | GOX0403 | GOX0401 | GOX0403 | Cell division inhibitor MinD. | Hypothetical protein. | 0.547 |
GOX0401 | GOX1737 | GOX0401 | GOX1737 | Cell division inhibitor MinD. | Rod shape-determining protein MreB. | 0.455 |
GOX0401 | GOX1738 | GOX0401 | GOX1738 | Cell division inhibitor MinD. | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | 0.767 |
GOX0401 | GOX1739 | GOX0401 | GOX1739 | Cell division inhibitor MinD. | Hypothetical transmembrane protein. | 0.715 |
GOX0401 | GOX1820 | GOX0401 | GOX1820 | Cell division inhibitor MinD. | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase. | 0.641 |
GOX0401 | accA | GOX0401 | GOX1791 | Cell division inhibitor MinD. | Acetyl-CoA carboxylase, carboxyl transferase alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. | 0.595 |
GOX0401 | ftsZ | GOX0401 | GOX0164 | Cell division inhibitor MinD. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.409 |
GOX0401 | lpxA | GOX0401 | GOX1822 | Cell division inhibitor MinD. | Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.683 |
GOX0401 | minC | GOX0401 | GOX0400 | Cell division inhibitor MinD. | Cell division inhibitor MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family. | 0.999 |
GOX0401 | minE | GOX0401 | GOX0402 | Cell division inhibitor MinD. | Cell division inhibitor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell. | 0.999 |
GOX0403 | GOX0401 | GOX0403 | GOX0401 | Hypothetical protein. | Cell division inhibitor MinD. | 0.547 |
GOX0403 | minE | GOX0403 | GOX0402 | Hypothetical protein. | Cell division inhibitor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell. | 0.584 |
GOX1737 | GOX0401 | GOX1737 | GOX0401 | Rod shape-determining protein MreB. | Cell division inhibitor MinD. | 0.455 |
GOX1737 | GOX1738 | GOX1737 | GOX1738 | Rod shape-determining protein MreB. | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | 0.994 |
GOX1737 | GOX1739 | GOX1737 | GOX1739 | Rod shape-determining protein MreB. | Hypothetical transmembrane protein. | 0.875 |
GOX1737 | ftsZ | GOX1737 | GOX0164 | Rod shape-determining protein MreB. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.695 |
GOX1737 | minC | GOX1737 | GOX0400 | Rod shape-determining protein MreB. | Cell division inhibitor MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family. | 0.549 |
GOX1738 | GOX0401 | GOX1738 | GOX0401 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Cell division inhibitor MinD. | 0.767 |
GOX1738 | GOX1737 | GOX1738 | GOX1737 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Rod shape-determining protein MreB. | 0.994 |
GOX1738 | GOX1739 | GOX1738 | GOX1739 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Hypothetical transmembrane protein. | 0.993 |
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