Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
GOX0579 | GOX0580 | Phosphoglycolate phosphatase. | Beta-N-acetylhexosaminidase. | 0.590 |
GOX0579 | GOX0581 | Phosphoglycolate phosphatase. | Iron-chelating periplasmic-binding protein. | 0.527 |
GOX0579 | GOX0582 | Phosphoglycolate phosphatase. | ABC-type Fe3+-siderophore transport system, ATP-binding protein. | 0.527 |
GOX0579 | GOX0583 | Phosphoglycolate phosphatase. | ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.527 |
GOX0580 | GOX0579 | Beta-N-acetylhexosaminidase. | Phosphoglycolate phosphatase. | 0.590 |
GOX0580 | GOX0581 | Beta-N-acetylhexosaminidase. | Iron-chelating periplasmic-binding protein. | 0.686 |
GOX0580 | GOX0582 | Beta-N-acetylhexosaminidase. | ABC-type Fe3+-siderophore transport system, ATP-binding protein. | 0.686 |
GOX0580 | GOX0583 | Beta-N-acetylhexosaminidase. | ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.686 |
GOX0580 | GOX0584 | Beta-N-acetylhexosaminidase. | Hypothetical protein. | 0.471 |
GOX0581 | GOX0579 | Iron-chelating periplasmic-binding protein. | Phosphoglycolate phosphatase. | 0.527 |
GOX0581 | GOX0580 | Iron-chelating periplasmic-binding protein. | Beta-N-acetylhexosaminidase. | 0.686 |
GOX0581 | GOX0582 | Iron-chelating periplasmic-binding protein. | ABC-type Fe3+-siderophore transport system, ATP-binding protein. | 0.980 |
GOX0581 | GOX0583 | Iron-chelating periplasmic-binding protein. | ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.994 |
GOX0581 | GOX0584 | Iron-chelating periplasmic-binding protein. | Hypothetical protein. | 0.525 |
GOX0581 | GOX0585 | Iron-chelating periplasmic-binding protein. | Cytochrome c subunit of aldehyde dehydrogenase. | 0.500 |
GOX0581 | GOX0907 | Iron-chelating periplasmic-binding protein. | TonB-dependent outer membrane receptor. | 0.414 |
GOX0581 | GOX1012 | Iron-chelating periplasmic-binding protein. | Ferrichrome ABC transporter ATP-binding protein. | 0.817 |
GOX0581 | GOX1013 | Iron-chelating periplasmic-binding protein. | Ferrichrome ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.974 |
GOX0581 | GOX1045 | Iron-chelating periplasmic-binding protein. | Metal ABC transport system ATP-binding protein. | 0.706 |
GOX0582 | GOX0579 | ABC-type Fe3+-siderophore transport system, ATP-binding protein. | Phosphoglycolate phosphatase. | 0.527 |
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