STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GOX0655Oligopeptide ABC transporter ATP-binding protein OppF; Belongs to the ABC transporter superfamily. (310 aa)    
Predicted Functional Partners:
GOX0658
Oligopeptide ABC transporter permease protein OppC.
  
  0.999
GOX2121
Dipeptide ABC transport system permease protein DppC.
  
  0.997
GOX0657
Oligopeptide ABC transporter permease protein OppB.
  
  0.994
GOX2122
Dipeptide ABC transport system permease protein DppB.
  
  0.988
GOX0656
Oligopeptide ABC transporter ATP-binding protein OppD; Belongs to the ABC transporter superfamily.
 
  
 
0.979
GOX1726
ABC transporter dipeptide binding protein.
 
  
  0.973
GOX2123
Dipeptide-binding protein of ABC transport system.
  
  0.967
GOX2120
Dipeptide ABC transport system ATP-binding protein DppD.
  
  
 
0.915
GOX2119
Dipeptide ABC transport system ATP-binding protein DppF.
  
  
 
0.908
GOX1012
Ferrichrome ABC transporter ATP-binding protein.
 
   
0.817
Your Current Organism:
Gluconobacter oxydans
NCBI taxonomy Id: 290633
Other names: G. oxydans 621H, Gluconobacter oxydans 621H, Gluconobacter oxydans str. 621H, Gluconobacter oxydans strain 621H
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