GOX0657 protein (Gluconobacter oxydans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

GOX0657

Oligopeptide ABC transporter permease protein OppB. (327 aa)

Predicted Functional Partners:

GOX0658

0.998

GOX0655

0.994

GOX0656

0.994

GOX2121

0.993

GOX2123

0.988

GOX1726

0.987

GOX2120

0.978

GOX2119

0.976

GOX2122

0.927

GOX0659

0.553

Your Current Organism:

Gluconobacter oxydans

NCBI taxonomy Id: 290633
Other names: G. oxydans 621H, Gluconobacter oxydans 621H, Gluconobacter oxydans str. 621H, Gluconobacter oxydans strain 621H

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
GOX0655	GOX0656	Oligopeptide ABC transporter ATP-binding protein OppF; Belongs to the ABC transporter superfamily.	Oligopeptide ABC transporter ATP-binding protein OppD; Belongs to the ABC transporter superfamily.	0.979
GOX0655	GOX0657	Oligopeptide ABC transporter ATP-binding protein OppF; Belongs to the ABC transporter superfamily.	Oligopeptide ABC transporter permease protein OppB.	0.994
GOX0655	GOX0658	Oligopeptide ABC transporter ATP-binding protein OppF; Belongs to the ABC transporter superfamily.	Oligopeptide ABC transporter permease protein OppC.	0.999
GOX0655	GOX0659	Oligopeptide ABC transporter ATP-binding protein OppF; Belongs to the ABC transporter superfamily.	Hypothetical protein.	0.553
GOX0655	GOX1726	Oligopeptide ABC transporter ATP-binding protein OppF; Belongs to the ABC transporter superfamily.	ABC transporter dipeptide binding protein.	0.973
GOX0655	GOX2119	Oligopeptide ABC transporter ATP-binding protein OppF; Belongs to the ABC transporter superfamily.	Dipeptide ABC transport system ATP-binding protein DppF.	0.908
GOX0655	GOX2120	Oligopeptide ABC transporter ATP-binding protein OppF; Belongs to the ABC transporter superfamily.	Dipeptide ABC transport system ATP-binding protein DppD.	0.915
GOX0655	GOX2121	Oligopeptide ABC transporter ATP-binding protein OppF; Belongs to the ABC transporter superfamily.	Dipeptide ABC transport system permease protein DppC.	0.997
GOX0655	GOX2122	Oligopeptide ABC transporter ATP-binding protein OppF; Belongs to the ABC transporter superfamily.	Dipeptide ABC transport system permease protein DppB.	0.988
GOX0655	GOX2123	Oligopeptide ABC transporter ATP-binding protein OppF; Belongs to the ABC transporter superfamily.	Dipeptide-binding protein of ABC transport system.	0.967
GOX0656	GOX0655	Oligopeptide ABC transporter ATP-binding protein OppD; Belongs to the ABC transporter superfamily.	Oligopeptide ABC transporter ATP-binding protein OppF; Belongs to the ABC transporter superfamily.	0.979
GOX0656	GOX0657	Oligopeptide ABC transporter ATP-binding protein OppD; Belongs to the ABC transporter superfamily.	Oligopeptide ABC transporter permease protein OppB.	0.994
GOX0656	GOX0658	Oligopeptide ABC transporter ATP-binding protein OppD; Belongs to the ABC transporter superfamily.	Oligopeptide ABC transporter permease protein OppC.	0.999
GOX0656	GOX0659	Oligopeptide ABC transporter ATP-binding protein OppD; Belongs to the ABC transporter superfamily.	Hypothetical protein.	0.553
GOX0656	GOX1726	Oligopeptide ABC transporter ATP-binding protein OppD; Belongs to the ABC transporter superfamily.	ABC transporter dipeptide binding protein.	0.974
GOX0656	GOX2119	Oligopeptide ABC transporter ATP-binding protein OppD; Belongs to the ABC transporter superfamily.	Dipeptide ABC transport system ATP-binding protein DppF.	0.920
GOX0656	GOX2120	Oligopeptide ABC transporter ATP-binding protein OppD; Belongs to the ABC transporter superfamily.	Dipeptide ABC transport system ATP-binding protein DppD.	0.911
GOX0656	GOX2121	Oligopeptide ABC transporter ATP-binding protein OppD; Belongs to the ABC transporter superfamily.	Dipeptide ABC transport system permease protein DppC.	0.997
GOX0656	GOX2122	Oligopeptide ABC transporter ATP-binding protein OppD; Belongs to the ABC transporter superfamily.	Dipeptide ABC transport system permease protein DppB.	0.994
GOX0656	GOX2123	Oligopeptide ABC transporter ATP-binding protein OppD; Belongs to the ABC transporter superfamily.	Dipeptide-binding protein of ABC transport system.	0.968