Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GOX0662 | GOX0663 | GOX0662 | GOX0663 | Cation-transporting ATPase. | ABC transporter ATP-binding protein. | 0.584 |
GOX0663 | GOX0662 | GOX0663 | GOX0662 | ABC transporter ATP-binding protein. | Cation-transporting ATPase. | 0.584 |
GOX0663 | GOX1045 | GOX0663 | GOX1045 | ABC transporter ATP-binding protein. | Metal ABC transport system ATP-binding protein. | 0.539 |
GOX0663 | GOX2074 | GOX0663 | GOX2074 | ABC transporter ATP-binding protein. | 5-Methyltetrahydrofolate-S-homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.404 |
GOX0663 | recA | GOX0663 | GOX1522 | ABC transporter ATP-binding protein. | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.722 |
GOX1045 | GOX0663 | GOX1045 | GOX0663 | Metal ABC transport system ATP-binding protein. | ABC transporter ATP-binding protein. | 0.539 |
GOX2074 | GOX0663 | GOX2074 | GOX0663 | 5-Methyltetrahydrofolate-S-homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | ABC transporter ATP-binding protein. | 0.404 |
recA | GOX0663 | GOX1522 | GOX0663 | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | ABC transporter ATP-binding protein. | 0.722 |