STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GOX0677Iron transport regulator protein/ sensor kinase. (305 aa)    
Predicted Functional Partners:
GOX0676
Iron-regulated sigma factor/transcriptional regulator; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.959
GOX1339
Hypothetical protein.
     
  0.900
GOX1340
Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.848
GOX2178
TonB-dependent receptor; Disrupted by IS element.
 
 
 0.833
GOX2180
TonB-dependent receptor (disrupted by IS element).
 
 
 0.820
GOX0541
TonB-dependent outer membrane receptor.
 
 
 0.778
GOX0678
TonB-dependent outer membrane receptor.
 
    0.736
GOX1341
TonB-dependent outer membrane receptor.
 
    0.718
GOX0665
Outer membrane receptor for ferric iron uptake.
 
  
 0.607
GOX0666
Outer membrane receptor for ferric iron uptake.
 
  
 0.601
Your Current Organism:
Gluconobacter oxydans
NCBI taxonomy Id: 290633
Other names: G. oxydans 621H, Gluconobacter oxydans 621H, Gluconobacter oxydans str. 621H, Gluconobacter oxydans strain 621H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.