Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GOX0131 | GOX0631 | GOX0131 | GOX0631 | Thioredoxin reductase. | Thioredoxin reductase. | 0.910 |
GOX0131 | GOX0762 | GOX0131 | GOX0762 | Thioredoxin reductase. | Thioredoxin. | 0.815 |
GOX0131 | GOX1764 | GOX0131 | GOX1764 | Thioredoxin reductase. | Glutathione reductase. | 0.481 |
GOX0416 | GOX0762 | GOX0416 | GOX0762 | Protein-tyrosine phosphatase. | Thioredoxin. | 0.776 |
GOX0631 | GOX0131 | GOX0631 | GOX0131 | Thioredoxin reductase. | Thioredoxin reductase. | 0.910 |
GOX0631 | GOX0762 | GOX0631 | GOX0762 | Thioredoxin reductase. | Thioredoxin. | 0.815 |
GOX0762 | GOX0131 | GOX0762 | GOX0131 | Thioredoxin. | Thioredoxin reductase. | 0.815 |
GOX0762 | GOX0416 | GOX0762 | GOX0416 | Thioredoxin. | Protein-tyrosine phosphatase. | 0.776 |
GOX0762 | GOX0631 | GOX0762 | GOX0631 | Thioredoxin. | Thioredoxin reductase. | 0.815 |
GOX0762 | GOX0763 | GOX0762 | GOX0763 | Thioredoxin. | ATP-dependent protease La. | 0.782 |
GOX0762 | GOX0764 | GOX0762 | GOX0764 | Thioredoxin. | Hypothetical protein; Belongs to the UPF0434 family. | 0.818 |
GOX0762 | GOX1764 | GOX0762 | GOX1764 | Thioredoxin. | Glutathione reductase. | 0.947 |
GOX0762 | GOX1992 | GOX0762 | GOX1992 | Thioredoxin. | Osmotically inducible protein C. | 0.660 |
GOX0762 | fusA | GOX0762 | GOX0105 | Thioredoxin. | Protein Translation Elongation Factor G (EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase fami [...] | 0.769 |
GOX0762 | grpE | GOX0762 | GOX0820 | Thioredoxin. | GrpE protein (HSP-70 cofactor); Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds [...] | 0.793 |
GOX0762 | htpG | GOX0762 | GOX1024 | Thioredoxin. | Chaperone protein HtpG; Molecular chaperone. Has ATPase activity. | 0.771 |
GOX0763 | GOX0762 | GOX0763 | GOX0762 | ATP-dependent protease La. | Thioredoxin. | 0.782 |
GOX0763 | GOX0764 | GOX0763 | GOX0764 | ATP-dependent protease La. | Hypothetical protein; Belongs to the UPF0434 family. | 0.793 |
GOX0764 | GOX0762 | GOX0764 | GOX0762 | Hypothetical protein; Belongs to the UPF0434 family. | Thioredoxin. | 0.818 |
GOX0764 | GOX0763 | GOX0764 | GOX0763 | Hypothetical protein; Belongs to the UPF0434 family. | ATP-dependent protease La. | 0.793 |
page 1 of 2