GOX0772 protein (Gluconobacter oxydans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

GOX0772

Transcriptional regulator. (135 aa)

Predicted Functional Partners:

tatA

0.643

GOX0275

0.618

GOX0771

0.602

GOX0628

0.566

GOX0599

0.527

GOX0770

0.465

ftsQ

0.458

GOX1426

0.451

GOX0773

0.420

GOX0118

0.417

Your Current Organism:

Gluconobacter oxydans

NCBI taxonomy Id: 290633
Other names: G. oxydans 621H, Gluconobacter oxydans 621H, Gluconobacter oxydans str. 621H, Gluconobacter oxydans strain 621H

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GOX0118	GOX0275	GOX0118	GOX0275	Hypothetical protein.	Hypothetical protein.	0.550
GOX0118	GOX0628	GOX0118	GOX0628	Hypothetical protein.	Hypothetical protein.	0.520
GOX0118	GOX0772	GOX0118	GOX0772	Hypothetical protein.	Transcriptional regulator.	0.417
GOX0118	tatA	GOX0118	GOX1241	Hypothetical protein.	Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.	0.412
GOX0275	GOX0118	GOX0275	GOX0118	Hypothetical protein.	Hypothetical protein.	0.550
GOX0275	GOX0628	GOX0275	GOX0628	Hypothetical protein.	Hypothetical protein.	0.435
GOX0275	GOX0772	GOX0275	GOX0772	Hypothetical protein.	Transcriptional regulator.	0.618
GOX0275	GOX1426	GOX0275	GOX1426	Hypothetical protein.	Hypothetical protein.	0.410
GOX0275	ftsQ	GOX0275	GOX0162	Hypothetical protein.	Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.	0.687
GOX0275	tatA	GOX0275	GOX1241	Hypothetical protein.	Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.	0.536
GOX0599	GOX0628	GOX0599	GOX0628	Hypothetical protein.	Hypothetical protein.	0.655
GOX0599	GOX0772	GOX0599	GOX0772	Hypothetical protein.	Transcriptional regulator.	0.527
GOX0599	tatA	GOX0599	GOX1241	Hypothetical protein.	Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.	0.404
GOX0628	GOX0118	GOX0628	GOX0118	Hypothetical protein.	Hypothetical protein.	0.520
GOX0628	GOX0275	GOX0628	GOX0275	Hypothetical protein.	Hypothetical protein.	0.435
GOX0628	GOX0599	GOX0628	GOX0599	Hypothetical protein.	Hypothetical protein.	0.655
GOX0628	GOX0772	GOX0628	GOX0772	Hypothetical protein.	Transcriptional regulator.	0.566
GOX0628	GOX1426	GOX0628	GOX1426	Hypothetical protein.	Hypothetical protein.	0.695
GOX0628	tatA	GOX0628	GOX1241	Hypothetical protein.	Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.	0.442
GOX0770	GOX0771	GOX0770	GOX0771	Hypothetical protein.	Ferric uptake regulation protein; Belongs to the Fur family.	0.604