Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GOX0800 | GOX0801 | GOX0800 | GOX0801 | Possible amidotransferase. | tRNA pseudouridine synthase A; Belongs to the pseudouridine synthase RsuA family. | 0.942 |
GOX0800 | GOX0802 | GOX0800 | GOX0802 | Possible amidotransferase. | Hypothetical protein. | 0.818 |
GOX0800 | GOX0803 | GOX0800 | GOX0803 | Possible amidotransferase. | Cell division protein FtsK. | 0.490 |
GOX0800 | GOX0804 | GOX0800 | GOX0804 | Possible amidotransferase. | Ribosomal large subunit pseudouridine synthase A. | 0.471 |
GOX0800 | tadA | GOX0800 | GOX0799 | Possible amidotransferase. | Cytosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.654 |
GOX0801 | GOX0800 | GOX0801 | GOX0800 | tRNA pseudouridine synthase A; Belongs to the pseudouridine synthase RsuA family. | Possible amidotransferase. | 0.942 |
GOX0801 | GOX0802 | GOX0801 | GOX0802 | tRNA pseudouridine synthase A; Belongs to the pseudouridine synthase RsuA family. | Hypothetical protein. | 0.936 |
GOX0801 | GOX0803 | GOX0801 | GOX0803 | tRNA pseudouridine synthase A; Belongs to the pseudouridine synthase RsuA family. | Cell division protein FtsK. | 0.817 |
GOX0801 | GOX0804 | GOX0801 | GOX0804 | tRNA pseudouridine synthase A; Belongs to the pseudouridine synthase RsuA family. | Ribosomal large subunit pseudouridine synthase A. | 0.587 |
GOX0801 | tadA | GOX0801 | GOX0799 | tRNA pseudouridine synthase A; Belongs to the pseudouridine synthase RsuA family. | Cytosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.658 |
GOX0802 | GOX0800 | GOX0802 | GOX0800 | Hypothetical protein. | Possible amidotransferase. | 0.818 |
GOX0802 | GOX0801 | GOX0802 | GOX0801 | Hypothetical protein. | tRNA pseudouridine synthase A; Belongs to the pseudouridine synthase RsuA family. | 0.936 |
GOX0802 | GOX0803 | GOX0802 | GOX0803 | Hypothetical protein. | Cell division protein FtsK. | 0.501 |
GOX0802 | GOX0804 | GOX0802 | GOX0804 | Hypothetical protein. | Ribosomal large subunit pseudouridine synthase A. | 0.493 |
GOX0802 | coaD | GOX0802 | GOX0888 | Hypothetical protein. | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.790 |
GOX0802 | ftsY | GOX0802 | GOX1451 | Hypothetical protein. | Cell division protein FtsY-like protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components. | 0.452 |
GOX0802 | priA | GOX0802 | GOX0735 | Hypothetical protein. | Primosomal replication factor Y, primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | 0.433 |
GOX0802 | pyrH | GOX0802 | GOX1812 | Hypothetical protein. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.431 |
GOX0802 | rlmH | GOX0802 | GOX1150 | Hypothetical protein. | Hypothetical protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.532 |
GOX0802 | tadA | GOX0802 | GOX0799 | Hypothetical protein. | Cytosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.716 |
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