Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GOX0913 | GOX0914 | GOX0913 | GOX0914 | Putative transport protein. | Putative transport protein. | 0.962 |
GOX0913 | GOX2140 | GOX0913 | GOX2140 | Putative transport protein. | Putative permease. | 0.686 |
GOX0913 | GOX2141 | GOX0913 | GOX2141 | Putative transport protein. | Putative permease. | 0.685 |
GOX0913 | gcvP | GOX0913 | GOX1097 | Putative transport protein. | Glycine dehydrogenase [decarboxylating]; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.400 |
GOX0914 | GOX0913 | GOX0914 | GOX0913 | Putative transport protein. | Putative transport protein. | 0.962 |
GOX0914 | GOX0915 | GOX0914 | GOX0915 | Putative transport protein. | Hypothetical protein. | 0.459 |
GOX0914 | GOX1288 | GOX0914 | GOX1288 | Putative transport protein. | Biopolymer transport ExbD protein. | 0.546 |
GOX0914 | GOX1290 | GOX0914 | GOX1290 | Putative transport protein. | Hypothetical protein. | 0.508 |
GOX0914 | GOX2140 | GOX0914 | GOX2140 | Putative transport protein. | Putative permease. | 0.450 |
GOX0914 | GOX2141 | GOX0914 | GOX2141 | Putative transport protein. | Putative permease. | 0.422 |
GOX0914 | gcvP | GOX0914 | GOX1097 | Putative transport protein. | Glycine dehydrogenase [decarboxylating]; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.400 |
GOX0915 | GOX0914 | GOX0915 | GOX0914 | Hypothetical protein. | Putative transport protein. | 0.459 |
GOX1288 | GOX0914 | GOX1288 | GOX0914 | Biopolymer transport ExbD protein. | Putative transport protein. | 0.546 |
GOX1288 | GOX1290 | GOX1288 | GOX1290 | Biopolymer transport ExbD protein. | Hypothetical protein. | 0.932 |
GOX1290 | GOX0914 | GOX1290 | GOX0914 | Hypothetical protein. | Putative transport protein. | 0.508 |
GOX1290 | GOX1288 | GOX1290 | GOX1288 | Hypothetical protein. | Biopolymer transport ExbD protein. | 0.932 |
GOX2140 | GOX0913 | GOX2140 | GOX0913 | Putative permease. | Putative transport protein. | 0.686 |
GOX2140 | GOX0914 | GOX2140 | GOX0914 | Putative permease. | Putative transport protein. | 0.450 |
GOX2140 | GOX2141 | GOX2140 | GOX2141 | Putative permease. | Putative permease. | 0.994 |
GOX2141 | GOX0913 | GOX2141 | GOX0913 | Putative permease. | Putative transport protein. | 0.685 |
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