STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GOX1478Capsule polysaccharide export protein; WcbA homolog. (576 aa)    
Predicted Functional Partners:
GOX1479
Capsule export protein; WcbO homolog.
   
 0.979
GOX1485
Capsule polysaccharide export inner-membrane protein; KpsM homolog.
 
  
 0.966
GOX1483
Capsule polysaccharide export protein; WcbC homolog.
 
  
 0.964
GOX1484
Capsule polysaccharide export inner-membrane protein; WcbD homolog.
 
  
 0.964
GOX1480
Mannosyltransferase; WcbB homolog.
    0.957
GOX1477
Capsule polysaccharide biosynthesis protein; WcbQ homolog.
 
     0.855
GOX1486
Capsule polysaccharide export ATP-binding protein; KpsT homolog.
 
     0.806
GOX1482
Glycosyltransferase.
 
    0.661
GOX1422
O-antigene export system permease protein.
  
  
 0.612
GOX1544
ABC transporter permease protein.
  
  
 0.612
Your Current Organism:
Gluconobacter oxydans
NCBI taxonomy Id: 290633
Other names: G. oxydans 621H, Gluconobacter oxydans 621H, Gluconobacter oxydans str. 621H, Gluconobacter oxydans strain 621H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.