STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GOX1481Fatty acid hydroxylase. (155 aa)    
Predicted Functional Partners:
GOX1482
Glycosyltransferase.
       0.773
GOX1483
Capsule polysaccharide export protein; WcbC homolog.
       0.628
GOX0741
Hypothetical protein.
  
 
 0.520
GOX0340
Hypothetical transmembrane protein.
   
 
 0.478
GOX2260
Squalene-hopene cyclase.
   
 
 0.478
GOX2255
Hypothetical protein.
  
 
 0.474
GOX2258
Putative phytoene synthase; Similar to HpnD.
  
 
 0.474
GOX2417
Hypothetical protein.
 
     0.454
GOX1478
Capsule polysaccharide export protein; WcbA homolog.
       0.439
GOX1479
Capsule export protein; WcbO homolog.
       0.439
Your Current Organism:
Gluconobacter oxydans
NCBI taxonomy Id: 290633
Other names: G. oxydans 621H, Gluconobacter oxydans 621H, Gluconobacter oxydans str. 621H, Gluconobacter oxydans strain 621H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.