Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
GOX1502 | GOX1503 | Transposase (class IV). | Probable ATP-dependent helicase Lhr. | 0.513 |
GOX1502 | GOX1504 | Transposase (class IV). | ATP-dependent helicase HepA. | 0.513 |
GOX1502 | GOX1505 | Transposase (class IV). | Putative type II DNA modification enzyme. | 0.513 |
GOX1502 | GOX1506 | Transposase (class IV). | Putative chromosome segregation SMC protein. | 0.513 |
GOX1502 | GOX1507 | Transposase (class IV). | Putative restriction endonuclease. | 0.513 |
GOX1503 | GOX1502 | Probable ATP-dependent helicase Lhr. | Transposase (class IV). | 0.513 |
GOX1503 | GOX1504 | Probable ATP-dependent helicase Lhr. | ATP-dependent helicase HepA. | 0.951 |
GOX1503 | GOX1505 | Probable ATP-dependent helicase Lhr. | Putative type II DNA modification enzyme. | 0.951 |
GOX1503 | GOX1506 | Probable ATP-dependent helicase Lhr. | Putative chromosome segregation SMC protein. | 0.781 |
GOX1503 | GOX1507 | Probable ATP-dependent helicase Lhr. | Putative restriction endonuclease. | 0.946 |
GOX1504 | GOX1502 | ATP-dependent helicase HepA. | Transposase (class IV). | 0.513 |
GOX1504 | GOX1503 | ATP-dependent helicase HepA. | Probable ATP-dependent helicase Lhr. | 0.951 |
GOX1504 | GOX1505 | ATP-dependent helicase HepA. | Putative type II DNA modification enzyme. | 0.953 |
GOX1504 | GOX1506 | ATP-dependent helicase HepA. | Putative chromosome segregation SMC protein. | 0.792 |
GOX1504 | GOX1507 | ATP-dependent helicase HepA. | Putative restriction endonuclease. | 0.953 |
GOX1505 | GOX1502 | Putative type II DNA modification enzyme. | Transposase (class IV). | 0.513 |
GOX1505 | GOX1503 | Putative type II DNA modification enzyme. | Probable ATP-dependent helicase Lhr. | 0.951 |
GOX1505 | GOX1504 | Putative type II DNA modification enzyme. | ATP-dependent helicase HepA. | 0.953 |
GOX1505 | GOX1506 | Putative type II DNA modification enzyme. | Putative chromosome segregation SMC protein. | 0.793 |
GOX1505 | GOX1507 | Putative type II DNA modification enzyme. | Putative restriction endonuclease. | 0.958 |
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