Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GOX1663Hypothetical transmembrane protein. (754 aa)    
Predicted Functional Partners:
GOX1662
Hypothetical protein.
      0.952
GOX1666
Hypothetical protein.
 
   
 0.819
GOX1943
Hypothetical transmembrane protein.
  
     0.735
GOX1117
Hypothetical protein.
  
     0.718
GOX1942
Hypothetical protein.
  
     0.711
GOX0768
Transcriptional regulator.
  
     0.702
GOX0340
Hypothetical transmembrane protein.
  
     0.701
GOX0412
DNA polymerase III, delta subunit.
 
     0.669
GOX0180
Hypothetical protein.
  
     0.662
GOX0047
Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
     0.658
Your Current Organism:
Gluconobacter oxydans
NCBI taxonomy Id: 290633
Other names: G. oxydans 621H, Gluconobacter oxydans 621H, Gluconobacter oxydans str. 621H, Gluconobacter oxydans strain 621H
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