Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GOX0047 | GOX1732 | GOX0047 | GOX1732 | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | N-acetylmuramoyl-L-alanine amidase. | 0.593 |
GOX1284 | GOX1732 | GOX1284 | GOX1732 | Penicillin-binding protein 1 (Peptidoglycan synthetase). | N-acetylmuramoyl-L-alanine amidase. | 0.522 |
GOX1394 | GOX1732 | GOX1394 | GOX1732 | Putative fatty acyl CoA synthetase. | N-acetylmuramoyl-L-alanine amidase. | 0.593 |
GOX1732 | GOX0047 | GOX1732 | GOX0047 | N-acetylmuramoyl-L-alanine amidase. | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.593 |
GOX1732 | GOX1284 | GOX1732 | GOX1284 | N-acetylmuramoyl-L-alanine amidase. | Penicillin-binding protein 1 (Peptidoglycan synthetase). | 0.522 |
GOX1732 | GOX1394 | GOX1732 | GOX1394 | N-acetylmuramoyl-L-alanine amidase. | Putative fatty acyl CoA synthetase. | 0.593 |
GOX1732 | GOX1979 | GOX1732 | GOX1979 | N-acetylmuramoyl-L-alanine amidase. | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.593 |
GOX1732 | GOX2296 | GOX1732 | GOX2296 | N-acetylmuramoyl-L-alanine amidase. | Hypothetical protein; Belongs to the CinA family. | 0.437 |
GOX1732 | leuA | GOX1732 | GOX1733 | N-acetylmuramoyl-L-alanine amidase. | 2-Isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. | 0.441 |
GOX1732 | miaA | GOX1732 | GOX1086 | N-acetylmuramoyl-L-alanine amidase. | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.420 |
GOX1732 | nnrD | GOX1732 | GOX0090 | N-acetylmuramoyl-L-alanine amidase. | Putative sugar kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both ep [...] | 0.406 |
GOX1979 | GOX1732 | GOX1979 | GOX1732 | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | N-acetylmuramoyl-L-alanine amidase. | 0.593 |
GOX2296 | GOX1732 | GOX2296 | GOX1732 | Hypothetical protein; Belongs to the CinA family. | N-acetylmuramoyl-L-alanine amidase. | 0.437 |
leuA | GOX1732 | GOX1733 | GOX1732 | 2-Isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. | N-acetylmuramoyl-L-alanine amidase. | 0.441 |
miaA | GOX1732 | GOX1086 | GOX1732 | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | N-acetylmuramoyl-L-alanine amidase. | 0.420 |
nnrD | GOX1732 | GOX0090 | GOX1732 | Putative sugar kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both ep [...] | N-acetylmuramoyl-L-alanine amidase. | 0.406 |