Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GOX0151 | GOX1754 | GOX0151 | GOX1754 | Hypothetical protein. | Hypothetical protein. | 0.664 |
GOX0151 | GOX2285 | GOX0151 | GOX2285 | Hypothetical protein. | Peptidyl-prolyl cis-trans isomerase. | 0.622 |
GOX0151 | ftsA | GOX0151 | GOX0163 | Hypothetical protein. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.421 |
GOX0151 | ftsQ | GOX0151 | GOX0162 | Hypothetical protein. | Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily. | 0.957 |
GOX1284 | GOX1754 | GOX1284 | GOX1754 | Penicillin-binding protein 1 (Peptidoglycan synthetase). | Hypothetical protein. | 0.870 |
GOX1284 | ftsA | GOX1284 | GOX0163 | Penicillin-binding protein 1 (Peptidoglycan synthetase). | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.719 |
GOX1738 | GOX1754 | GOX1738 | GOX1754 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Hypothetical protein. | 0.721 |
GOX1738 | ftsA | GOX1738 | GOX0163 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.402 |
GOX1738 | ftsQ | GOX1738 | GOX0162 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily. | 0.567 |
GOX1752 | GOX1754 | GOX1752 | GOX1754 | Deoxyguanosinetriphosphate triphosphohydrolase; Belongs to the dGTPase family. Type 2 subfamily. | Hypothetical protein. | 0.706 |
GOX1752 | GOX1755 | GOX1752 | GOX1755 | Deoxyguanosinetriphosphate triphosphohydrolase; Belongs to the dGTPase family. Type 2 subfamily. | Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.696 |
GOX1752 | argS | GOX1752 | GOX1753 | Deoxyguanosinetriphosphate triphosphohydrolase; Belongs to the dGTPase family. Type 2 subfamily. | Arginyl-tRNA synthetase. | 0.718 |
GOX1752 | tatC | GOX1752 | GOX1758 | Deoxyguanosinetriphosphate triphosphohydrolase; Belongs to the dGTPase family. Type 2 subfamily. | Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.486 |
GOX1754 | GOX0151 | GOX1754 | GOX0151 | Hypothetical protein. | Hypothetical protein. | 0.664 |
GOX1754 | GOX1284 | GOX1754 | GOX1284 | Hypothetical protein. | Penicillin-binding protein 1 (Peptidoglycan synthetase). | 0.870 |
GOX1754 | GOX1738 | GOX1754 | GOX1738 | Hypothetical protein. | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | 0.721 |
GOX1754 | GOX1752 | GOX1754 | GOX1752 | Hypothetical protein. | Deoxyguanosinetriphosphate triphosphohydrolase; Belongs to the dGTPase family. Type 2 subfamily. | 0.706 |
GOX1754 | GOX1755 | GOX1754 | GOX1755 | Hypothetical protein. | Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.805 |
GOX1754 | GOX2285 | GOX1754 | GOX2285 | Hypothetical protein. | Peptidyl-prolyl cis-trans isomerase. | 0.701 |
GOX1754 | argS | GOX1754 | GOX1753 | Hypothetical protein. | Arginyl-tRNA synthetase. | 0.899 |
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