Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GOX1231 | GOX1375 | GOX1231 | GOX1375 | Gluconate 2-dehydrogenase alpha chain. | Gluconolactonase. | 0.901 |
GOX1231 | GOX1381 | GOX1231 | GOX1381 | Gluconate 2-dehydrogenase alpha chain. | Gluconolactonase. | 0.901 |
GOX1231 | GOX1793 | GOX1231 | GOX1793 | Gluconate 2-dehydrogenase alpha chain. | Transcriptional regulator; IclR family/regucalcin. | 0.503 |
GOX1375 | GOX1231 | GOX1375 | GOX1231 | Gluconolactonase. | Gluconate 2-dehydrogenase alpha chain. | 0.901 |
GOX1375 | GOX1381 | GOX1375 | GOX1381 | Gluconolactonase. | Gluconolactonase. | 0.904 |
GOX1375 | GOX1793 | GOX1375 | GOX1793 | Gluconolactonase. | Transcriptional regulator; IclR family/regucalcin. | 0.623 |
GOX1375 | gdh | GOX1375 | GOX0265 | Gluconolactonase. | Membrane-bound glucose dehydrogenase (PQQ); Belongs to the bacterial PQQ dehydrogenase family. | 0.928 |
GOX1381 | GOX1231 | GOX1381 | GOX1231 | Gluconolactonase. | Gluconate 2-dehydrogenase alpha chain. | 0.901 |
GOX1381 | GOX1375 | GOX1381 | GOX1375 | Gluconolactonase. | Gluconolactonase. | 0.904 |
GOX1381 | GOX1793 | GOX1381 | GOX1793 | Gluconolactonase. | Transcriptional regulator; IclR family/regucalcin. | 0.727 |
GOX1381 | gdh | GOX1381 | GOX0265 | Gluconolactonase. | Membrane-bound glucose dehydrogenase (PQQ); Belongs to the bacterial PQQ dehydrogenase family. | 0.928 |
GOX1792 | GOX1793 | GOX1792 | GOX1793 | Putative competence-damage protein. | Transcriptional regulator; IclR family/regucalcin. | 0.545 |
GOX1793 | GOX1231 | GOX1793 | GOX1231 | Transcriptional regulator; IclR family/regucalcin. | Gluconate 2-dehydrogenase alpha chain. | 0.503 |
GOX1793 | GOX1375 | GOX1793 | GOX1375 | Transcriptional regulator; IclR family/regucalcin. | Gluconolactonase. | 0.623 |
GOX1793 | GOX1381 | GOX1793 | GOX1381 | Transcriptional regulator; IclR family/regucalcin. | Gluconolactonase. | 0.727 |
GOX1793 | GOX1792 | GOX1793 | GOX1792 | Transcriptional regulator; IclR family/regucalcin. | Putative competence-damage protein. | 0.545 |
GOX1793 | GOX2217 | GOX1793 | GOX2217 | Transcriptional regulator; IclR family/regucalcin. | Triosephosphate isomerase. | 0.449 |
GOX1793 | gdh | GOX1793 | GOX0265 | Transcriptional regulator; IclR family/regucalcin. | Membrane-bound glucose dehydrogenase (PQQ); Belongs to the bacterial PQQ dehydrogenase family. | 0.521 |
GOX1793 | rplQ | GOX1793 | GOX0355 | Transcriptional regulator; IclR family/regucalcin. | LSU ribosomal protein L17P. | 0.561 |
GOX2217 | GOX1793 | GOX2217 | GOX1793 | Triosephosphate isomerase. | Transcriptional regulator; IclR family/regucalcin. | 0.449 |
page 1 of 2