Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GOX0189 | GOX0190 | GOX0189 | GOX0190 | Aspartate aminotransferase A. | Aspartate aminotransferase A. | 0.982 |
GOX0189 | GOX1851 | GOX0189 | GOX1851 | Aspartate aminotransferase A. | Glutamate synthase [NADPH] small chain. | 0.905 |
GOX0189 | GOX1852 | GOX0189 | GOX1852 | Aspartate aminotransferase A. | Glutamate synthase [NADPH] large chain. | 0.955 |
GOX0189 | GOX2117 | GOX0189 | GOX2117 | Aspartate aminotransferase A. | Proline dehydrogenase/d-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.917 |
GOX0190 | GOX0189 | GOX0190 | GOX0189 | Aspartate aminotransferase A. | Aspartate aminotransferase A. | 0.982 |
GOX0190 | GOX1101 | GOX0190 | GOX1101 | Aspartate aminotransferase A. | Glutamine synthetase. | 0.454 |
GOX0190 | GOX1851 | GOX0190 | GOX1851 | Aspartate aminotransferase A. | Glutamate synthase [NADPH] small chain. | 0.905 |
GOX0190 | GOX1852 | GOX0190 | GOX1852 | Aspartate aminotransferase A. | Glutamate synthase [NADPH] large chain. | 0.955 |
GOX0190 | GOX2117 | GOX0190 | GOX2117 | Aspartate aminotransferase A. | Proline dehydrogenase/d-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.917 |
GOX1101 | GOX0190 | GOX1101 | GOX0190 | Glutamine synthetase. | Aspartate aminotransferase A. | 0.454 |
GOX1101 | GOX1851 | GOX1101 | GOX1851 | Glutamine synthetase. | Glutamate synthase [NADPH] small chain. | 0.946 |
GOX1101 | GOX1852 | GOX1101 | GOX1852 | Glutamine synthetase. | Glutamate synthase [NADPH] large chain. | 0.982 |
GOX1101 | GOX2117 | GOX1101 | GOX2117 | Glutamine synthetase. | Proline dehydrogenase/d-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.914 |
GOX1101 | carA | GOX1101 | GOX0321 | Glutamine synthetase. | Carbamoyl-phosphate synthase small chain; Belongs to the CarA family. | 0.930 |
GOX1101 | carB | GOX1101 | GOX0322 | Glutamine synthetase. | Carbamoyl-phosphate synthase large chain; Belongs to the CarB family. | 0.937 |
GOX1101 | glmS | GOX1101 | GOX0007 | Glutamine synthetase. | Glucosamine-fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.946 |
GOX1101 | purF | GOX1101 | GOX1640 | Glutamine synthetase. | Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. | 0.918 |
GOX1370 | GOX1851 | GOX1370 | GOX1851 | Ferredoxin, 2Fe-2S. | Glutamate synthase [NADPH] small chain. | 0.980 |
GOX1851 | GOX0189 | GOX1851 | GOX0189 | Glutamate synthase [NADPH] small chain. | Aspartate aminotransferase A. | 0.905 |
GOX1851 | GOX0190 | GOX1851 | GOX0190 | Glutamate synthase [NADPH] small chain. | Aspartate aminotransferase A. | 0.905 |
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