Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GOX0120 | GOX2290 | GOX0120 | GOX2290 | Osmolarity sensor protein envZ. | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.969 |
GOX0394 | GOX2290 | GOX0394 | GOX2290 | Two component sensor histidine kinase. | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.969 |
GOX0870 | GOX2290 | GOX0870 | GOX2290 | Electron transfer flavoprotein alpha-subunit. | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.979 |
GOX0882 | GOX1073 | GOX0882 | GOX1073 | 2-Oxoglutarate dehydrogenase E1 component. | Dihydrolipoamide succinyl transferase (E2) of 2-oxoglutarate dehydrogenase. | 0.999 |
GOX0882 | GOX1764 | GOX0882 | GOX1764 | 2-Oxoglutarate dehydrogenase E1 component. | Glutathione reductase. | 0.942 |
GOX0882 | GOX2290 | GOX0882 | GOX2290 | 2-Oxoglutarate dehydrogenase E1 component. | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.997 |
GOX0882 | GOX2291 | GOX0882 | GOX2291 | 2-Oxoglutarate dehydrogenase E1 component. | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.995 |
GOX0882 | GOX2292 | GOX0882 | GOX2292 | 2-Oxoglutarate dehydrogenase E1 component. | Dihydrolipoamide dehydrogenase. | 0.997 |
GOX0882 | pdhA | GOX0882 | GOX2289 | 2-Oxoglutarate dehydrogenase E1 component. | Pyruvate dehydrogenase E1 component alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.863 |
GOX0882 | prs | GOX0882 | GOX0964 | 2-Oxoglutarate dehydrogenase E1 component. | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.804 |
GOX1073 | GOX0882 | GOX1073 | GOX0882 | Dihydrolipoamide succinyl transferase (E2) of 2-oxoglutarate dehydrogenase. | 2-Oxoglutarate dehydrogenase E1 component. | 0.999 |
GOX1073 | GOX1764 | GOX1073 | GOX1764 | Dihydrolipoamide succinyl transferase (E2) of 2-oxoglutarate dehydrogenase. | Glutathione reductase. | 0.938 |
GOX1073 | GOX2290 | GOX1073 | GOX2290 | Dihydrolipoamide succinyl transferase (E2) of 2-oxoglutarate dehydrogenase. | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.996 |
GOX1073 | GOX2292 | GOX1073 | GOX2292 | Dihydrolipoamide succinyl transferase (E2) of 2-oxoglutarate dehydrogenase. | Dihydrolipoamide dehydrogenase. | 0.997 |
GOX1073 | pdhA | GOX1073 | GOX2289 | Dihydrolipoamide succinyl transferase (E2) of 2-oxoglutarate dehydrogenase. | Pyruvate dehydrogenase E1 component alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.973 |
GOX1073 | prs | GOX1073 | GOX0964 | Dihydrolipoamide succinyl transferase (E2) of 2-oxoglutarate dehydrogenase. | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.760 |
GOX1764 | GOX0882 | GOX1764 | GOX0882 | Glutathione reductase. | 2-Oxoglutarate dehydrogenase E1 component. | 0.942 |
GOX1764 | GOX1073 | GOX1764 | GOX1073 | Glutathione reductase. | Dihydrolipoamide succinyl transferase (E2) of 2-oxoglutarate dehydrogenase. | 0.938 |
GOX1764 | GOX2290 | GOX1764 | GOX2290 | Glutathione reductase. | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.999 |
GOX1764 | GOX2291 | GOX1764 | GOX2291 | Glutathione reductase. | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.971 |
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