Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GOX0167 | GOX2389 | GOX0167 | GOX2389 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | Ribosomal protein L11 methyltransferase. | 0.589 |
GOX0167 | GOX2390 | GOX0167 | GOX2390 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | DNA helicase II. | 0.492 |
GOX0167 | pheT | GOX0167 | GOX0261 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | Phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.649 |
GOX0167 | radA | GOX0167 | GOX0937 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.601 |
GOX2386 | GOX2387 | GOX2386 | GOX2387 | Hypothetical transmembrane protein. | Xaa-Pro aminopeptidase. | 0.620 |
GOX2386 | GOX2388 | GOX2386 | GOX2388 | Hypothetical transmembrane protein. | Putative acetyltransferase (Antibiotic resistance) protein. | 0.624 |
GOX2386 | GOX2389 | GOX2386 | GOX2389 | Hypothetical transmembrane protein. | Ribosomal protein L11 methyltransferase. | 0.570 |
GOX2386 | GOX2390 | GOX2386 | GOX2390 | Hypothetical transmembrane protein. | DNA helicase II. | 0.568 |
GOX2386 | GOX2391 | GOX2386 | GOX2391 | Hypothetical transmembrane protein. | DNA repair protein RadC. | 0.428 |
GOX2387 | GOX2386 | GOX2387 | GOX2386 | Xaa-Pro aminopeptidase. | Hypothetical transmembrane protein. | 0.620 |
GOX2387 | GOX2388 | GOX2387 | GOX2388 | Xaa-Pro aminopeptidase. | Putative acetyltransferase (Antibiotic resistance) protein. | 0.775 |
GOX2387 | GOX2389 | GOX2387 | GOX2389 | Xaa-Pro aminopeptidase. | Ribosomal protein L11 methyltransferase. | 0.763 |
GOX2387 | GOX2390 | GOX2387 | GOX2390 | Xaa-Pro aminopeptidase. | DNA helicase II. | 0.801 |
GOX2387 | GOX2391 | GOX2387 | GOX2391 | Xaa-Pro aminopeptidase. | DNA repair protein RadC. | 0.520 |
GOX2388 | GOX2386 | GOX2388 | GOX2386 | Putative acetyltransferase (Antibiotic resistance) protein. | Hypothetical transmembrane protein. | 0.624 |
GOX2388 | GOX2387 | GOX2388 | GOX2387 | Putative acetyltransferase (Antibiotic resistance) protein. | Xaa-Pro aminopeptidase. | 0.775 |
GOX2388 | GOX2389 | GOX2388 | GOX2389 | Putative acetyltransferase (Antibiotic resistance) protein. | Ribosomal protein L11 methyltransferase. | 0.708 |
GOX2388 | GOX2390 | GOX2388 | GOX2390 | Putative acetyltransferase (Antibiotic resistance) protein. | DNA helicase II. | 0.707 |
GOX2388 | GOX2391 | GOX2388 | GOX2391 | Putative acetyltransferase (Antibiotic resistance) protein. | DNA repair protein RadC. | 0.520 |
GOX2389 | GOX0167 | GOX2389 | GOX0167 | Ribosomal protein L11 methyltransferase. | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | 0.589 |
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