STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIGD7Tigger transposable element-derived protein 7. (548 aa)    
Predicted Functional Partners:
POGK
Pogo transposable element with KRAB domain.
      
 0.771
LOC103669600
Histone-lysine N-methyltransferase SETMAR.
   
 
 0.664
NAIF1
Nuclear apoptosis-inducing factor 1.
   
  
 0.644
STARD7
stAR-related lipid transfer protein 7, mitochondrial.
      
 0.598
CIAO3
Cytosolic Fe-S cluster assembly factor NARFL; Belongs to the NARF family.
      
 0.551
RAB11FIP3
LOW QUALITY PROTEIN: rab11 family-interacting protein 3.
      
 0.550
GNPTG
N-acetylglucosamine-1-phosphotransferase subunit gamma.
      
 0.520
PGBD5
piggyBac transposable element-derived protein 5.
      
 0.456
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.