STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIMCH1LOW QUALITY PROTEIN: LIM and calponin homology domains-containing protein 1. (175 aa)    
Predicted Functional Partners:
ENSUMAP00000001237
annotation not available
 
      0.900
ZNF445
Zinc finger protein 445.
    
 
 0.608
TXNDC12
Thioredoxin domain-containing protein 12 isoform X1.
    
 0.558
ENSUMAP00000007445
annotation not available
   
 
 0.528
LOC103680395
Zinc finger protein 28 homolog.
    
 
 0.524
TMEM69
Transmembrane protein 69.
      
 0.515
HIGD1B
HIG1 hypoxia inducible domain family member 1B.
   
  
 0.496
CDH24
Cadherin-24.
   
 
 0.487
ZNF827
Zinc finger protein 827.
    
 
 0.483
GAS2L2
GAS2-like protein 2.
   
 
 0.468
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.