STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUCB1Nucleobindin-1 isoform X2. (529 aa)    
Predicted Functional Partners:
IGHM
Immunoglobulin heavy constant mu.
      
 0.638
GPRIN1
LOW QUALITY PROTEIN: G protein-regulated inducer of neurite outgrowth 1.
    
 
 0.612
LTF
Lactotransferrin; Belongs to the transferrin family.
      
 0.610
ATL2
Atlastin GTPase 2.
      
 0.588
SURF4
Surfeit locus protein 4.
   
  
 0.579
CALU
Calumenin isoform X1.
   
 
 0.565
RCN1
Reticulocalbin 1.
   
 
 0.565
GC
Vitamin D-binding protein.
      
 0.562
GOLGB1
Golgin subfamily B member 1.
    
 
 0.552
PPP2R5D
Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.
      
 0.520
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.