STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB28Ras-related protein Rab-28. (217 aa)    
Predicted Functional Partners:
DENND3
LOW QUALITY PROTEIN: DENN domain-containing protein 3.
    
 0.674
DENND1C
DENN domain-containing protein 1C.
     
 0.672
DENND5A
DENN domain-containing protein 5A.
     
 0.666
DENND5B
DENN domain-containing protein 5B.
     
 0.659
ZNF653
Zinc finger protein 653.
    
 
 0.614
ZNF692
LOW QUALITY PROTEIN: zinc finger protein 692.
    
 
 0.603
RAB3IP
rab-3A-interacting protein.
    
 0.594
C8orf37
Chromosome 8 open reading frame 37.
      
 0.571
RILPL1
RILP-like protein 1.
    
 0.567
ENSUMAP00000003688
annotation not available
     
 0.546
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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