STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPP6Membrane palmitoylated protein 6; Belongs to the MAGUK family. (539 aa)    
Predicted Functional Partners:
CAMK2D
Calcium/calmodulin-dependent protein kinase type II subunit delta isoform X1.
 
 
 0.783
APBA1
Amyloid beta A4 precursor protein-binding family A member 1.
   
 0.713
APBA2
Amyloid beta A4 precursor protein-binding family A member 2.
   
 0.713
LIN7A
Lin-7 homolog A, crumbs cell polarity complex component.
    
 0.690
LIN7B
Protein lin-7 homolog B.
    
 0.664
LIN7C
Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.
    
 0.664
CAMK2G
Calcium/calmodulin-dependent protein kinase type II subunit gamma.
 
 
  0.624
RIMS2
Regulating synaptic membrane exocytosis protein 2 isoform X1.
   
 
 0.572
POLR2F
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
  
  
 0.533
WHRN
Whirlin.
    
 0.522
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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