STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RASSF9Ras association domain-containing protein 9. (431 aa)    
Predicted Functional Partners:
PAM
Peptidyl-glycine alpha-amidating monooxygenase.
    
 
 0.780
MMRN1
Multimerin-1.
      
 0.713
C12orf50
Uncharacterized protein C12orf50 homolog.
      
 0.587
MRPL18
39S ribosomal protein L18, mitochondrial isoform X1.
      
 0.587
TSPAN19
Tetraspanin.
   
  
 0.585
TRPT1
tRNA 2'-phosphotransferase 1 isoform X1.
      
 0.572
CNKSR1
Connector enhancer of kinase suppressor of ras 1.
      
 0.560
C12orf29
Uncharacterized protein C12orf29 homolog.
      
 0.549
MYBPC2
Myosin-binding protein C, fast-type.
      
 0.549
ASAP3
LOW QUALITY PROTEIN: arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3.
      
 0.549
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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