STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF654Zinc finger protein 654. (1130 aa)    
Predicted Functional Partners:
LTN1
E3 ubiquitin-protein ligase listerin isoform X1.
   
 
  0.680
VSIG10
V-set and immunoglobulin domain-containing protein 10.
      
 0.565
LRRC1
Leucine-rich repeat-containing protein 1.
    
 0.544
ZNF366
Zinc finger protein 366.
      
 0.521
RCAN3
Calcipressin-3.
      
 0.521
TMEM120B
Transmembrane protein 120B.
      
 0.513
PPFIA4
Liprin-alpha-4.
      
 0.511
ENSUMAP00000031543
annotation not available
      
 0.508
COL6A3
LOW QUALITY PROTEIN: collagen alpha-3(VI) chain.
    
 0.469
CCDC6
Coiled-coil domain-containing protein 6.
    
 
 0.460
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.