STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRR12LOW QUALITY PROTEIN: proline-rich protein 12. (843 aa)    
Predicted Functional Partners:
PRR16
Proline-rich protein 16 isoform X1.
      
 0.611
PAGR1
PAXIP1-associated glutamate-rich protein 1.
      
 0.589
SH3PXD2B
SH3 and PX domain-containing protein 2B.
      
 0.529
INSC
INSC spindle orientation adaptor protein.
   
  
 0.520
SCAF1
SR-related CTD associated factor 1.
   
  
 0.499
ZFHX4
Zinc finger homeobox protein 4.
   
  
 0.484
SH3PXD2A
LOW QUALITY PROTEIN: SH3 and PX domain-containing protein 2A.
      
 0.480
TP53BP1
LOW QUALITY PROTEIN: tumor suppressor p53-binding protein 1.
    
   0.467
PHRF1
LOW QUALITY PROTEIN: PHD and RING finger domain-containing protein 1.
   
  
 0.464
PAXIP1
PAX-interacting protein 1.
   
  
 0.412
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.