STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POGZPogo transposable element with ZNF domain isoform X1. (1414 aa)    
Predicted Functional Partners:
PSIP1
PC4 and SFRS1-interacting protein isoform X1.
    
 
 0.907
CBX3
Chromobox protein homolog 3.
   
 
 0.857
CBX5
Chromobox protein homolog 5.
   
 
 0.806
CBX1
Chromobox protein homolog 1.
   
 
 0.753
ENSUMAP00000027030
annotation not available
   
 
 0.753
CHD4
LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 4.
   
 0.735
MEN1
Non-specific serine/threonine protein kinase; May play a role in the response to environmental stress. Appears to act upstream of the JUN N-terminal pathway.
   
 0.733
SP1
Sp1 transcription factor.
    
 
 0.659
KCTD2
Potassium channel tetramerization domain containing 2.
    
  0.658
UBE2I
SUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.658
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.