STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM24RNA-binding protein 24. (167 aa)    
Predicted Functional Partners:
RBFOX1
RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.
   
 
 0.677
RBFOX2
RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.
   
 
 0.648
MTMR11
Myotubularin-related protein 11.
      
 0.646
SRSF10
LOW QUALITY PROTEIN: serine/arginine-rich splicing factor 10-like.
      
 0.589
ENSUMAP00000025938
annotation not available
      
 0.589
PXMP4
Peroxisomal membrane protein 4 isoform X2.
      
 0.569
CELF6
CUGBP Elav-like family member 6.
      
 0.541
PCBP4
poly(RC)-binding protein 4.
      
 0.541
ZNF341
LOW QUALITY PROTEIN: zinc finger protein 341.
      
 0.539
NCAPH
Condensin complex subunit 2; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes.
      
 0.515
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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