STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RABAC1PRA1 family protein. (276 aa)    
Predicted Functional Partners:
COPE
LOW QUALITY PROTEIN: coatomer subunit epsilon.
   
  
 0.751
YIF1A
Yip1 interacting factor homolog A, membrane trafficking protein.
   
 
 0.649
YIF1B
Protein YIF1B.
   
 
 0.641
MOB3C
MOB kinase activator 3C.
      
 0.639
AKAP6
A-kinase anchoring protein 6.
      
 0.636
SLC4A3
Anion exchange protein.
      
 0.636
NSF
N-ethylmaleimide sensitive factor, vesicle fusing ATPase.
      
 0.601
AGBL4
Cytosolic carboxypeptidase 6.
      
 0.551
SYPL2
Synaptophysin-like protein 2.
    
 
 0.550
JOSD2
Josephin domain containing 2.
   
  
 0.535
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.