STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSBP2Single-stranded DNA-binding protein 2 isoform X4. (390 aa)    
Predicted Functional Partners:
LDB1
LIM domain-binding protein 1 isoform X1.
   
 
 0.682
RNF11
RING finger protein 11.
   
    0.630
LDB2
LIM domain-binding protein 2 isoform X1.
   
 
 0.627
PARP8
Poly [ADP-ribose] polymerase.
      
 0.455
SLC4A3
Anion exchange protein.
      
 0.455
PAX3
Paired box protein Pax-3 isoform X1.
      
 0.452
LHX1
LOW QUALITY PROTEIN: LIM/homeobox protein Lhx1.
    
 
 0.436
RUVBL1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 
 0.414
SHROOM2
LOW QUALITY PROTEIN: protein Shroom2.
      
 0.402
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.