STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RUBCNRun domain Beclin-1 interacting and cysteine-rich containing protein isoform X1. (939 aa)    
Predicted Functional Partners:
UVRAG
UV radiation resistance-associated gene protein.
    
 0.990
BECN1
Beclin-1 isoform X1.
    
 
 0.925
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 
 0.890
RAB7A
RAB7A, member RAS oncogene family.
    
 
 0.785
BECN2
Beclin-2.
    
 
 0.773
ATG14
Beclin 1-associated autophagy-related key regulator.
    
 
 0.686
ZFYVE1
LOW QUALITY PROTEIN: zinc finger FYVE domain-containing protein 1.
      
 0.638
PIK3R4
Phosphoinositide 3-kinase regulatory subunit 4.
    
 
 0.607
SERINC5
Serine incorporator 5.
      
 0.573
SERINC3
Serine incorporator 3.
      
 0.549
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.