STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGM2Protein-glutamine gamma-glutamyltransferase 2. (687 aa)    
Predicted Functional Partners:
FN1
Fibronectin isoform X1.
   
 0.735
ANXA1
Annexin.
   
 0.613
RHAG
Ammonium transporter Rh type A; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily.
   
 
 0.603
TSG101
Tumor susceptibility gene 101 protein.
   
  
 0.591
RSU1
Ras Suppressor protein 1.
    
 
 0.548
PDLIM1
PDZ and LIM domain protein 1.
   
 
 0.520
F13B
Coagulation factor XIII B chain.
    
 0.507
HCRTR2
Orexin receptor type 2; Belongs to the G-protein coupled receptor 1 family.
   
  
 0.454
PDLIM5
PDZ and LIM domain protein 5 isoform X2.
   
 
 0.454
COTL1
Coactosin-like protein.
      
 0.453
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.