Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
USP7Ubiquitin carboxyl-terminal hydrolase 7; Belongs to the peptidase C19 family. (1086 aa)    
Predicted Functional Partners:
TP53
Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family.
    
 0.996
UVSSA
UV-stimulated scaffold protein A.
    
 0.994
DAXX
Death domain-associated protein 6.
    
 0.990
USP11
Ubiquitin carboxyl-terminal hydrolase 11; Belongs to the peptidase C19 family.
   
 0.987
FOXO4
Forkhead box protein O4 isoform X1.
   
 0.969
GMPS
GMP synthase [glutamine-hydrolyzing].
   
 
 0.966
TRIP12
E3 ubiquitin-protein ligase TRIP12 isoform X2.
   
 
 0.966
TRIM27
LOW QUALITY PROTEIN: zinc finger protein RFP.
    
 
 0.958
FOXO1
Forkhead box protein O1.
   
 0.955
FOXO3
Forkhead box protein O3.
   
 0.955
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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