STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HTR3ALOW QUALITY PROTEIN: 5-hydroxytryptamine receptor 3A; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (226 aa)    
Predicted Functional Partners:
HTR3B
5-hydroxytryptamine receptor 3B; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
     
0.953
LOC103676188
5-hydroxytryptamine receptor 3C-like; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
    
0.913
HTR3E
5-hydroxytryptamine receptor 3E isoform X1; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
    
0.782
LOC103676187
5-hydroxytryptamine receptor 3C-like; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
    
0.782
LOC103676087
5-hydroxytryptamine receptor 3C-like isoform X2; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
    
0.782
TANC1
Protein TANC1.
      
 0.561
KCNG4
LOW QUALITY PROTEIN: potassium voltage-gated channel subfamily G member 4; Belongs to the potassium channel family.
   
  
 0.547
TMTC2
Transmembrane and TPR repeat-containing protein 2 isoform X1.
    
 
 0.546
HTR2A
5-hydroxytryptamine receptor 2A.
      
 0.539
HTR1D
5-hydroxytryptamine receptor 1D.
   
  
 0.528
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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