STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103670380LOW QUALITY PROTEIN: histidine triad nucleotide-binding protein 1-like. (132 aa)    
Predicted Functional Partners:
TAF1D
TATA-box binding protein associated factor, RNA polymerase I subunit D.
    
 0.861
TAF1B
TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1.
    
 0.858
TAF1A
TATA box-binding protein-associated factor RNA polymerase I subunit A.
    
 0.842
TBP
TATA-box-binding protein.
    
 0.690
TBPL2
TATA box-binding protein-like protein 2.
    
 0.690
SUOX
Sulfite oxidase, mitochondrial isoform X1.
   
  0.656
CES1
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
   
  
 0.643
CREBBP
CREB-binding protein.
     
 0.642
RRN3
RNA polymerase I-specific transcription initiation factor RRN3.
    
 0.638
CTNNB1
Catenin beta-1.
   
  0.636
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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