STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPNE1Copine-1. (537 aa)    
Predicted Functional Partners:
REPS1
ralBP1-associated Eps domain-containing protein 1 isoform X1.
      
 0.598
IRGQ
LOW QUALITY PROTEIN: immunity-related GTPase family Q protein.
   
 
 0.574
ADPGK
ADP-dependent glucokinase.
   
  
 0.519
ERGIC3
Endoplasmic reticulum-Golgi intermediate compartment protein 3 isoform X1.
   
  
 0.511
SPAG4
Sperm-associated antigen 4 protein.
      
 0.491
UQCC1
Ubiquinol-cytochrome-c reductase complex assembly factor 1 isoform X1.
      
 0.491
CDC42SE2
CDC42 small effector protein 2.
      
 0.491
AATF
Protein AATF.
      
 0.489
RNASEH2B
Ribonuclease H2 subunit B.
   
 
 0.482
CEP250
LOW QUALITY PROTEIN: centrosome-associated protein CEP250.
    
 
 0.445
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.