STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSUMAP00000006119annotation not available (64 aa)    
Predicted Functional Partners:
RPS27A
ubiquitin-40S ribosomal protein S27a.
   
 0.674
TRIM17
E3 ubiquitin-protein ligase TRIM17.
    
 
 0.634
USP13
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
   
  
 0.572
UCHL3
Ubiquitin carboxyl-terminal hydrolase.
      
 0.561
MPND
MPN domain-containing protein.
   
 
 0.556
ENSUMAP00000006417
annotation not available
    
  0.547
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.547
ATXN3
LOW QUALITY PROTEIN: ataxin-3.
     
 0.531
FBXL14
F-box/LRR-repeat protein 14.
   
  
 0.531
RNF149
E3 ubiquitin-protein ligase RNF149.
   
 
 0.523
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
Server load: low (24%) [HD]