STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAOD-amino-acid oxidase. (347 aa)    
Predicted Functional Partners:
SHMT1-2
Serine hydroxymethyltransferase 1.
  
 
 0.951
SHMT2
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.951
PIPOX
Pipecolic acid and sarcosine oxidase.
   
 
 0.938
L3HYPDH
trans-L-3-hydroxyproline dehydratase isoform X1.
  
 
 0.936
HAO1
Hydroxyacid oxidase 1.
   
 
 0.921
ALAS1
5-aminolevulinate synthase.
  
 
 0.913
GNMT
Glycine N-methyltransferase.
   
 
 0.909
GRHPR
Glyoxylate reductase/hydroxypyruvate reductase isoform X1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 
 0.888
HAO2
Hydroxyacid oxidase 2.
   
 
 0.884
SRR
LOW QUALITY PROTEIN: serine racemase.
   
 
 0.849
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.