STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC88CLOW QUALITY PROTEIN: protein Daple. (1918 aa)    
Predicted Functional Partners:
NUDT2
Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical].
      
 0.647
KCNF1
Potassium voltage-gated channel subfamily F member 1; Belongs to the potassium channel family.
    
 
 0.638
NOL10
Nucleolar protein 10.
      
 0.636
TRIM46
Tripartite motif-containing protein 46.
    
 
 0.635
STRN3
Striatin-3 isoform X1.
      
 0.588
PPP6R3
Serine/threonine-protein phosphatase 6 regulatory subunit 3 isoform X1.
    
 
 0.572
TCL1B
T-cell leukemia/lymphoma protein 1B.
      
 0.549
LOC103682075
Segment polarity protein dishevelled homolog DVL-1-like.
    
 0.532
ARVCF
Armadillo repeat protein deleted in velo-cardio-facial syndrome.
    
 
 0.530
HM13
Minor histocompatibility antigen H13.
      
 0.522
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.