STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPN1SWShort-wave-sensitive opsin 1 isoform X1. (348 aa)    
Predicted Functional Partners:
RHO
Rhodopsin.
   
 
  0.889
LOC103679666
Long-wave-sensitive opsin 1.
   
 
 0.878
SAMD7
Sterile alpha motif domain-containing protein 7.
      
 0.855
GNAT2
Guanine nucleotide-binding protein G(T) subunit alpha-2.
   
 0.826
GNB3
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3.
    
 0.823
GNB4
Guanine nucleotide-binding protein subunit beta-4 isoform X1.
    
 0.817
GNB2
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2.
    
 0.817
GNGT1
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
 0.779
GNG11
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
 0.779
GNAT1
LOW QUALITY PROTEIN: guanine nucleotide-binding protein G(T) subunit alpha-1.
   
 0.767
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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