STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSMEM1Leucine-rich single-pass membrane protein 1. (127 aa)    
Predicted Functional Partners:
ETNPPL
Ethanolamine-phosphate phospho-lyase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
      
 0.783
ZBTB1
Zinc finger and BTB domain-containing protein 1.
      
 0.751
PPP1R3A
Protein phosphatase 1 regulatory subunit 3A.
   
  
 0.606
ZFAND2A
Zinc finger AN1-type containing 2A.
      
 0.569
RGS22
Regulator of G-protein signaling 22.
      
 0.569
WDR47
WD repeat-containing protein 47 isoform X1.
      
 0.565
SERPINC1
antithrombin-III; Belongs to the serpin family.
      
 0.548
RCC1
Regulator of chromosome condensation isoform X1.
      
 0.528
PPP1R10
LOW QUALITY PROTEIN: serine/threonine-protein phosphatase 1 regulatory subunit 10.
    
 
 0.523
MLF1
Myeloid leukemia factor 1.
   
  
 0.466
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.