STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLCA2Colorectal cancer-associated protein 2 isoform X2. (199 aa)    
Predicted Functional Partners:
WBP1L
WW domain binding protein 1-like isoform X1.
      
 0.774
RLF
LOW QUALITY PROTEIN: zinc finger protein Rlf.
      
 0.773
C11orf53
Uncharacterized protein C11orf53 homolog.
  
   
 0.656
C11orf87
Chromosome 11 open reading frame 87.
      
 0.534
POU2AF1
POU domain class 2-associating factor 1 isoform X2.
      
 0.532
ARHGAP20
Rho GTPase-activating protein 20.
      
 0.532
MAP7D2
MAP7 domain-containing protein 2.
      
 0.525
BTG4
BTG anti-proliferation factor 4.
      
 0.516
LAYN
Layilin.
      
 0.514
FDX1
Adrenodoxin, mitochondrial.
      
 0.506
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.