STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH23Cadherin-23. (3364 aa)    
Predicted Functional Partners:
PCDH15
Protocadherin-15.
   
0.995
USH1C
LOW QUALITY PROTEIN: harmonin.
   
 
 0.967
MYO7A
Unconventional myosin-VIIa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.935
CEACAM16
LOW QUALITY PROTEIN: carcinoembryonic antigen-related cell adhesion molecule 16.
    
 0.782
ADGRV1
LOW QUALITY PROTEIN: G-protein coupled receptor 98; Belongs to the G-protein coupled receptor 2 family.
      
 0.775
CDHR5
Cadherin-related family member 5.
   
 0.774
USH2A
LOW QUALITY PROTEIN: usherin.
   
  
 0.773
MYO7B
Unconventional myosin-VIIb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.761
MYO3A
myosin-IIIa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.757
ANKS4B
Ankyrin repeat and SAM domain-containing protein 4B isoform X1.
   
 0.752
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.