STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP1Matrix metallopeptidase 1. (466 aa)    
Predicted Functional Partners:
MMP2
72 kDa type IV collagenase.
   
 
0.967
LOC103662455
LOW QUALITY PROTEIN: interstitial collagenase-like.
  
  
 
0.901
TIMP2
Metalloproteinase inhibitor 2 isoform X1.
   
 0.702
MMP20
Matrix metalloproteinase-20.
  
 
0.640
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.614
MMP9
Matrix metalloproteinase-9.
  
0.593
MMP12
Matrix metallopeptidase 12.
  
 
0.569
LOC103662452
Stromelysin-1.
  
 
0.562
ATP2B4
Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.
      
 0.535
BSG
Basigin.
    
 0.527
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.