STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCARF1Scavenger receptor class F member 1. (364 aa)    
Predicted Functional Partners:
AVIL
Advillin isoform X2.
    
 
 0.545
ATP8B2
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
      
 0.534
VPREB3
V-set pre-B cell surrogate light chain 3.
    
 
 0.507
CD300LF
CMRF35-like molecule 1 isoform X1.
    
 0.493
COL3A1
Collagen alpha-1(III) chain.
     
 0.460
INO80D
INO80 complex subunit D.
      
 0.457
BPIFB1
BPI fold-containing family B member 1 isoform X1.
      
 0.457
CD36
Platelet glycoprotein 4 isoform X1; Belongs to the CD36 family.
      
 0.456
RAD54L2
LOW QUALITY PROTEIN: helicase ARIP4.
   
  
 0.456
ECRG4
ECRG4 augurin precursor.
      
 0.455
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.